BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017A03SP1|AL427097
(944 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1779 1739 0.0
>3x_Contig1779
Length = 24855
Score = 1739 bits (865), Expect = 0.0
Identities = 913/941 (97%), Gaps = 1/941 (0%)
Strand = Plus / Plus
Query: 2 caaaacaatgatttcacatttcagcttgatrttggaggcagtagcaataatccaaagatt 61
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 9895 caaaacaatgatttcacatttcagcttgatgttggaggcagtagcaataatccaaagatt 9954
Query: 62 ttctttggccctaacggggaaatcagaagawgggactaccccagcagacctgttttattt 121
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 9955 ttctttggccctaacggggaaatcagaagaagggactaccccagcagacctgttttattt 10014
Query: 122 aataacgcgttgatcaggacacagtaccataaggwttggwagcatgagtggagacagcga 181
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 10015 aataacgcgttgatcaggacacagtaccataaggattggaagcatgagtggagacagcga 10074
Query: 182 gtagaaaahwtggaggagagahaagagaccggcgtcagtmcgtacttcaaatttcctgag 241
|||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 10075 gtagaaaaaatggaggagagaaaagagaccggcgtcagtacgtacttcaaatttcctgag 10134
Query: 242 attctatttccgahagtgaaagtcgatttaacagatgcccctttggtcaacgacaatggg 301
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10135 attctatttccgaaagtgaaagtcgatttaacagatgcccctttggtcaacgacaatggg 10194
Query: 302 gaaatgatacawaaggaaagatgggctagcatcaaaagacatttgahagttgttcgaacc 361
||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 10195 gaaatgatacaaaaggaaagaagggctagcatcaaaagacatttgaaagttgttcgaacc 10254
Query: 362 cctgttggattggtaaagacgccaagaactatccttgtgcatatwagtggtagagaacat 421
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10255 cctgttggattggtaaagacgccaagaactatccttgtgcatataagtggtagagaacat 10314
Query: 422 acttgggttgctctagattgggctatggccgaattggctgaggacattgattatttwgtt 481
|| |||||||| |||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 10315 acatgggttgcactagattgggctatggccgaattggctgaggacattgattatatagtt 10374
Query: 482 attattgchaathttcccagaagagattggtcgactagaagtggttcttatacgagatcg 541
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10375 attattgcaaatattcccagaagagattggtcgactagaagtggttcttatacgagatcg 10434
Query: 542 aggtcagcatcgagatctcgctctcgttctagatctaggatgagatctgtctctcggact 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10435 aggtcagcatcgagatctcgctctcgttctagatctaggatgagatctgtctctcggact 10494
Query: 602 cgggaattcggtaccgatgatgatcaacctgatgctacttggtgtgacggttgcwcggtt 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 10495 cgggaattcggtaccgatgatgatcaacctgatgctacttggtgtgacggttgcacggtt 10554
Query: 662 ggggaagtaaatkacttgcttcagcggctcatcgaatattctactttgatcatgggtggt 721
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10555 ggggaagtaaatgacttgcttcagcggctcatcgaatattctactttgatcatgggtggt 10614
Query: 722 aagaagctcaaaataacagttgaaattgtgatcggttcgacttcgcaaatattgattgat 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10615 aagaagctcaaaataacagttgaaattgtgatcggttcgacttcgcaaatattgattgat 10674
Query: 782 tcattaaatgcgtacgctccagatttttttgtcatcggcagtwctattgataaatatggc 841
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 10675 tcattaaatgcgtacgctccagatttttttgtcatcggcagttctattgataaatatggc 10734
Query: 842 tcgggatcagttgttggtgcataagtaaagamatttggctccggtgctgatgcagtattt 901
||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 10735 tcgggatcagttgtt-gtgcataagtcaagacatttggctccggtgctgatgcagtattt 10793
Query: 902 ccctattcccgttttttttgtggmtgcaagagggatgggat 942
||||||||||||||||||||||| |||||| |||||||||
Sbjct: 10794 ccctattcccgttttttttgtggctgcaaggaggatgggat 10834
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4785
Number of Sequences: 1807
Number of extensions: 4785
Number of successful extensions: 22
Number of sequences better than 1.0e-20: 1
length of query: 944
length of database: 10,358,551
effective HSP length: 16
effective length of query: 928
effective length of database: 10,329,639
effective search space: 9585904992
effective search space used: 9585904992
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)